Fig. 1
From: Unbiased anchors for reliable genome-wide synteny detection
Pairwise Anchor Matches. For each anchor candidate in both genomes A and B the bit scores of the best matches in the same genome are precomputed (numbers inside the lines). Possible Anchor matches are obtained from a blast search and clasp chaining. Only matches with scores significantly better than their within-genome thresholds are retained as anchor matches