Fig. 8
From: TINNiK: inference of the tree of blobs of a species network under the coalescent model
(L) For the Kauai dataset, TINNiK’s tree of blobs supports the PhyloNet and SNaQ analyses for a wide range of test levels \(\alpha ,\beta \), regardless of handling of unresolved quartet topologies. (C) The TINNiK tree of blobs for the Oahu dataset when \(\alpha = 0.05\) and \(\beta = 0.3\) with either treatment of polytomies conflicts with both SNaQ and PhyloNet analyses. It supports some blob structure, but not that inferred by SNaQ. (R) The tree obtained by contracting cycles in the SNaQ network inferred from the Oahu dataset. PhyloNet infers a resolved tree for these data