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Fig. 6 | Algorithms for Molecular Biology

Fig. 6

From: Pfp-fm: an accelerated FM-index

Fig. 6

Impact of Dataset Size and Query Pattern Length on Query Execution Time. This figure presents a comparative analysis of query times for count operations across various datasets: SARS-25K, SARS-50K, SARS-100K, and GRCH38, using a consistent query pattern length of 1,000. The cumulative time required for executing 1000 count queries is illustrated, with the y-axis representing time in \(\log \) scale. Note that for the GRCH38 dataset, due to the computation time exceeding two days, the data were not recorded

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Algorithms for Molecular Biology

ISSN: 1748-7188