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Table 8 Compression results for varying number of colors for E.coli (\(k=31\))

From: Compression algorithm for colored de Bruijn graphs

C

n. k-mers \(\times \) \(10^6\)

M

bits/\(k\)-mer (k=31)

   

ESS-Color

GGCAT

10

14

544

2.6

3.0

100

31

506,577

4.6

5.5

500

61

1,671,449

9.6

11.4

1000

82

2,509,863

13.9

16.0

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Algorithms for Molecular Biology

ISSN: 1748-7188