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Fig. 3 | Algorithms for Molecular Biology

Fig. 3

From: Detecting transcriptomic structural variants in heterogeneous contexts via the Multiple Compatible Arrangements Problem

Fig. 3

Performance of D-SQUID and SQUID on breast cancer cell lines with experimentally verified SV. a Total TSVs found. In both cell line samples, D-SQUID discovered more TSVs than SQUID. b Number of known fusion-gene and non-fusion-gene events recovered by D-SQUID and SQUID. G denotes TSVs that affect gene regions. IG denotes TSVs that affect intergenic regions. c Fraction of discordant edges in conflict structures

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Algorithms for Molecular Biology

ISSN: 1748-7188