Fig. 1
From: An average-case sublinear forward algorithm for the haploid Li and Stephens model
Information content of array of template haplotypes. (i) Reference panel \(\{h_1,\ldots ,h_5\}\) with mismatches to haplotype o shown in yellow. (ii) Alleles at site i of elements of \(\phi _i(o_i)\) in black. (iii) Vectors to encode \(\phi _i(o_i)\) at each site